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Showing posts from May, 2017

Bioconductor histories with git-svn

If you are developing a software you might be using a version control (If not do it :). Bioconductor until 05/2017 is using svn. However it is migrating to git, meanwhile a hybrid system is provided, where one submits the project through GitHub using git control version system and internally it uses svn. Here are some experiences developing in for Bioconductor in this configuration . After following the recommendations of the configuration .git/config ends up with: [core]     repositoryformatversion = 0     filemode = true     bare = false     logallrefupdates = true [remote "origin"]     url = https://github.com/llrs/BioCor.git     fetch = +refs/heads/*:refs/remotes/origin/* [branch "master"]     remote = origin     merge = refs/heads/master [remote "bioc"]     url = https://github.com/Bioconductor-mirror/BioCor.git     fetch = +refs/heads/*:refs/remotes/bioc/* [svn-remote "devel"]     url = https://hedgehog.fhcrc.org/biocond